Publications

Andersson, D., Wilhelmsson, U., Nilsson, M., Kubista, M., Stahlberg, A., Pekna, M., Pekny, M. Plasticity response in the contralesional hemisphere after subtle neurotrauma: gene expression profiling after partial deafferentation of the hippocampus. PLoS ONE, 8(7): e706992013, 2013. ISSN 1932-6203.

Flachsova, M., Sindelka, R., Kubista, M. Single blastomere expression profiling of Xenopus laevis embryos of 8 to 32-cells reveals developmental asymmetry. Scientific Reports, 3: 2278, 2013. ISSN: 2045-2322.

Virant-Klun, I., Skutella, T., Kubista, M., Vogler A., Sinkovec, J., Meden-Vrtovec, H. Expression of Pluripotency and Oocyte-Related Genes in Single Putative Stem Cells from Human Adult Ovarian Surface Epithelium Cultured In Vitro in the Presence of Follicular Fluid. BioMed Research International, 861460, 2013. ISSN: 2314-6133.

Rusnakova, V., Honsa, P., Dzamba, D., Stahlberg A., Kubista, M., Anderova, M. Heterogeneity of Astrocytes: From Development to Injury – Single Cell Gene Expression. PLoS ONE 8(8): e69734, 2013. ISSN 1932-6203.

Malentacchi, F., Pazzagli, M., Simi, L., Orlando, C., Wyrich, R., Hartmann, C. C., Verderio, P., Pizzamiglio, S., Ciniselli, C. M., Tichopad, A., Kubista, M., Gelmini, S. SPIDIA-DNA: An External Quality Assessment for the pre-analytical phase of blood samples used for DNA-based analyses. Clinica Chimica Acta 424: 274–286, 2013. ISSN 0009-8981.

Dusatkova, L., Zamrazilova, H., Sedlackova, B., Vcelak, J., Hlavaty, P., Aldhoon Hainerova, I., Korenkova, V., Bradnova, O., Bendlova, B., Kunesova, M., Hainer, V. Association of obesity susceptibility gene variants with metabolic syndrome and related traits in 1,443 czech adolescents. Folia Biologica 59: 123-133, 2013. ISSN 0015-5500.

Polakova Vymetalkova, V., Vannucci, L., Korenkova, V., Prochazka, P., Slyskova, J., Vodickova, L., Rusnakova, V., Bielik, L., Burocziova, M., Rossmann, P., Vodicka, P. Evaluation of tumor suppressor gene expressions and aberrant methylation in the colon of cancer-induced rats: a pilot study. Molecular Biology Reports, 40(10): 5921-5929, 2013. doi: 10.1007/s11033-013-2699-8. ISSN 0301-4851.

Bar, T., Kubista, M., Tichopad, A. Validation of kinetics similarity in qPCR. Nucleic Acids Research, 40: 1395-1406, 2012. ISSN 0305-1048. 

Benesova, J., Rusnakova, V., Honsa, P., Pivonkova, H., Dzamba, D., Kubista, M., Anderova, M. Distinct expression/function of potassium and chloride channels contributes to the diverse volume regulation in cortical astrocytes of GFAP/EGFP mice. PLoS ONE, 7: e29725, 2012. ISSN 1932-6203. 

Bibova, I., Linhartova, I., Stanek, O., Rusnakova, V., Kubista, M., Suchanek, M., Vasakova, M., Sebo, P. Detection of immune cell response to M. tuberculosis-specific antigens by quantitative polymerase chain reaction. Diagnostic Microbiology and Infectious Disease, 72: 68-78, 2012. ISSN 0732-8893. 

Guenther, K., Malentacchi, F., Verderio, P., Pizzamiglio, S., Ciniselli, Ch. M., Tichopad, A., Kubista, M., Wyrich, R., Pazzagli, M., Gelmini, S. Implementation of a proficiency testing for the assessment of the preanalytical phase of blood samples used for RNA based analysis. Clinica Chimica Acta, 413: 779-786, 2012. ISSN 0009-8981. 

Laurell, H., Iacovoni, J., Abot, A., Svec, D., Maoret, J.-J., Arnal, J.-F., Kubista, M. Correction of RT-qPCR data for genomic DNA-derived signals with ValidPrime. Nucleic Acids Research, 40: 1-10, 2012. ISSN 0305-1048. 

Stimpfel, M., Skutella, T., Kubista, M., Malicev, E., Conrad, S., Virant-Klun, I. Potential Stemness of Frozen-Thawed Testicular Biopsies without Sperm in Infertile Men Included into the In Vitro Fertilization Programme. Journal of Biomedicine and Biotechnology, 291038: 1-15, 2012. ISSN 1110-7243. 

Slyskova, J., Korenkova, V., Collins, A. R., Prochazka, P., Vodickova, L., Svec, J., Lipska, L., Levy, M., Schneiderova, M., Liska, V., Holubec, L., Kumar, R., Soucek, P., Naccarati, A., Vodicka, P. Functional, Genetic, and Epigenetic Aspects of Base and Nucleotide Excision Repair in Colorectal Carcinoma. Clinical Cancer Research, 18:5878-5887, 2012. ISSN 1078-0432.

Sorg, D., Danowski, K., Korenkova, V., Rusnakova, V., Küffner, R., Zimmer, R., Meyer, H. H., Kliem, H. Microfluidic high-throughput RTqPCR measurements of the immune response of primary bovine mammary epithelial cells cultured from milk to mastitis pathogens. Animal, 7(5): 799-805, 2012. ISSN 1751-7311.

Ahmadi, S., Deligeorgiev, T. G., Vasilev, A., Kubista, M. The dimerization study of some cationic monomethine cyanine dyes by chemometrics method. Russian Journal of Physical Chemistry, 86(13): 1974-1981, 2012. ISSN 0036-0244.

Kubista, M. Q & A. European Pharmaceutical Review, 17(5): 57, 2012.

Kubista, M., Tichopad, A. Setting the bar. European Pharmaceutical Review, 17(5): 53-56, 2012.

Kubista, M. I See the Light! And I See It Again and Again! Clinical Chemistry, 58(11): 1505-1506, 2012. ISSN 0009-9147.

Guertler, P., Brandl, C., Meyer, H. H. D., Tichopad, A. Feeding genetically modified maize (MON810) to dairy cows: comparison of gene expression pattern of markers for apoptosis, inflammation and cell cycle. Journal fur Verbraucherschutz und Lebensmittelsicherheit-Journal of Consumer Protection and Food Safety, 7(3):195-202, 2012. ISSN 1661-5751.

Butenko, O., Dzamba, D., Benesova, J., Honsa, P., Benfenati, V., Rusnakova, V., Ferroni, S., Anderova, M. The Increased Activity of TRPV4 Channel in the Astrocytes of the Adult Rat Hippocampus after Cerebral Hypoxia/Ischemia. PLoS ONE, 7(6): e39959, 2012. ISSN 1932-6203.

Brevik, A., Lindeman, B., Rusnakova, V., Olsen, A. K., Brunborg, G., Duale, N. Paternal benzo[a]pyrene exposure affects gene expression in the early developing mouse embryo. Toxicological Sciences, 129(1), 2012. ISSN 1096-6080.

Kubista, M., Rusnakova, V., Svec, D., Sjogreen, B., Tichopad, A. Genex: Data Analysis Software. Quantitative Real-Time PCR in Applied Microbiology, 63-84, 2012. ISBN 978-1-908230-01-0.

Kubista, M. Drivers and Hurdles for qPCR. Genetic Engineering & Biotechnology News, 32(9): 24, 2012. ISSN 1935-472X.

Pazzagli, M., Malentacchi, F., Simi, L., Orlando, C., Wyrich, R., Gunther, K., Hartmann, C., Verderio, P., Pizzamiglio, S., Ciniselli, C. M., Tichopad, A., Kubista, M., Gelmini, S. Evidence-based quality guidelines for pre-analytical phase of blood samples. Clinical Chemistry and Laboratory Medicine, 49(1): 128, 2011. ISSN 1434-6621.

Brevik, A., Rusnakova, V., Duale, N., Slagsvold, H. H., Olsen, A.-K., Storeng, R., Kubista, M., Brunborg, G., Lindeman, B. Preconceptional paternal glycidamide exposure affects embryonic gene expression: Single embryo gene expression study following in vitro fertilization. Reproductive Toxicology, 32: 463-471, 2011. ISSN 0890-6238.

Bustin, A., Benes, V., Garson, J. A., Hellemans, J., Huggett, J., Kubista, M., Mueller, R., Nolan, T., Pfaffl , M. W., Shipley, G. L., Vandesompele, J., Wittwer, C. T. Primer Sequence Disclosure: A Clarification of the MIQE Guideline. Clinical Chemistry, 57: 919-921, 2011. ISSN 0009-9147.

Stahlberg, A., Kubista, M., Aman, P. Single-cell gene-expression profiling and its potential diagnostic application. Expert Review of Molecular Diagnostics, 11: 735-740, 2011. ISSN 1473-7159.

Kubista, M., Stahlberg, A. DNA diagnostics get digitased. Drug Discovery World, 2011.

Kubista, M., Tichopad, A. qPCR Round Table. International Drug Discovery 2011.