Publications

Guenther, K., Malentacchi, F., Verderio, P., Pizzamiglio, S., Ciniselli, Ch. M., Tichopad, A., Kubista, M., Wyrich, R., Pazzagli, M., Gelmini, S. Implementation of a proficiency testing for the assessment of the preanalytical phase of blood samples used for RNA based analysis. Clinica Chimica Acta, 413: 779-786, 2012. ISSN 0009-8981. 

Laurell, H., Iacovoni, J., Abot, A., Svec, D., Maoret, J.-J., Arnal, J.-F., Kubista, M. Correction of RT-qPCR data for genomic DNA-derived signals with ValidPrime. Nucleic Acids Research, 40: 1-10, 2012. ISSN 0305-1048. 

Stimpfel, M., Skutella, T., Kubista, M., Malicev, E., Conrad, S., Virant-Klun, I. Potential Stemness of Frozen-Thawed Testicular Biopsies without Sperm in Infertile Men Included into the In Vitro Fertilization Programme. Journal of Biomedicine and Biotechnology, 291038: 1-15, 2012. ISSN 1110-7243. 

Slyskova, J., Korenkova, V., Collins, A. R., Prochazka, P., Vodickova, L., Svec, J., Lipska, L., Levy, M., Schneiderova, M., Liska, V., Holubec, L., Kumar, R., Soucek, P., Naccarati, A., Vodicka, P. Functional, Genetic, and Epigenetic Aspects of Base and Nucleotide Excision Repair in Colorectal Carcinoma. Clinical Cancer Research, 18:5878-5887, 2012. ISSN 1078-0432.

Sorg, D., Danowski, K., Korenkova, V., Rusnakova, V., Küffner, R., Zimmer, R., Meyer, H. H., Kliem, H. Microfluidic high-throughput RTqPCR measurements of the immune response of primary bovine mammary epithelial cells cultured from milk to mastitis pathogens. Animal, 7(5): 799-805, 2012. ISSN 1751-7311.

Ahmadi, S., Deligeorgiev, T. G., Vasilev, A., Kubista, M. The dimerization study of some cationic monomethine cyanine dyes by chemometrics method. Russian Journal of Physical Chemistry, 86(13): 1974-1981, 2012. ISSN 0036-0244.

Kubista, M. Q & A. European Pharmaceutical Review, 17(5): 57, 2012.

Kubista, M., Tichopad, A. Setting the bar. European Pharmaceutical Review, 17(5): 53-56, 2012.

Kubista, M. I See the Light! And I See It Again and Again! Clinical Chemistry, 58(11): 1505-1506, 2012. ISSN 0009-9147.

Guertler, P., Brandl, C., Meyer, H. H. D., Tichopad, A. Feeding genetically modified maize (MON810) to dairy cows: comparison of gene expression pattern of markers for apoptosis, inflammation and cell cycle. Journal fur Verbraucherschutz und Lebensmittelsicherheit-Journal of Consumer Protection and Food Safety, 7(3):195-202, 2012. ISSN 1661-5751.

Butenko, O., Dzamba, D., Benesova, J., Honsa, P., Benfenati, V., Rusnakova, V., Ferroni, S., Anderova, M. The Increased Activity of TRPV4 Channel in the Astrocytes of the Adult Rat Hippocampus after Cerebral Hypoxia/Ischemia. PLoS ONE, 7(6): e39959, 2012. ISSN 1932-6203.

Brevik, A., Lindeman, B., Rusnakova, V., Olsen, A. K., Brunborg, G., Duale, N. Paternal benzo[a]pyrene exposure affects gene expression in the early developing mouse embryo. Toxicological Sciences, 129(1), 2012. ISSN 1096-6080.

Kubista, M., Rusnakova, V., Svec, D., Sjogreen, B., Tichopad, A. Genex: Data Analysis Software. Quantitative Real-Time PCR in Applied Microbiology, 63-84, 2012. ISBN 978-1-908230-01-0.

Kubista, M. Drivers and Hurdles for qPCR. Genetic Engineering & Biotechnology News, 32(9): 24, 2012. ISSN 1935-472X.

Pazzagli, M., Malentacchi, F., Simi, L., Orlando, C., Wyrich, R., Gunther, K., Hartmann, C., Verderio, P., Pizzamiglio, S., Ciniselli, C. M., Tichopad, A., Kubista, M., Gelmini, S. Evidence-based quality guidelines for pre-analytical phase of blood samples. Clinical Chemistry and Laboratory Medicine, 49(1): 128, 2011. ISSN 1434-6621.

Brevik, A., Rusnakova, V., Duale, N., Slagsvold, H. H., Olsen, A.-K., Storeng, R., Kubista, M., Brunborg, G., Lindeman, B. Preconceptional paternal glycidamide exposure affects embryonic gene expression: Single embryo gene expression study following in vitro fertilization. Reproductive Toxicology, 32: 463-471, 2011. ISSN 0890-6238.

Bustin, A., Benes, V., Garson, J. A., Hellemans, J., Huggett, J., Kubista, M., Mueller, R., Nolan, T., Pfaffl , M. W., Shipley, G. L., Vandesompele, J., Wittwer, C. T. Primer Sequence Disclosure: A Clarification of the MIQE Guideline. Clinical Chemistry, 57: 919-921, 2011. ISSN 0009-9147.

Stahlberg, A., Kubista, M., Aman, P. Single-cell gene-expression profiling and its potential diagnostic application. Expert Review of Molecular Diagnostics, 11: 735-740, 2011. ISSN 1473-7159.

Kubista, M., Stahlberg, A. DNA diagnostics get digitased. Drug Discovery World, 2011.

Kubista, M., Tichopad, A. qPCR Round Table. International Drug Discovery 2011.

Gruber, H., Paul, V., Guertler, P., Spiekers, H., Tichopad, A., Meyer, H. H. D., Muller M. Fate of Cry1Ab Protein in Agricultural Systems under Slurry Management of Cows Fed Genetically Modified Maize (Zea mays L.) MON810: A Quantitative Assessment. J Agric Food Chem 2011.

Kubista, M., Rusnakova, V., Svec, D., Stahlberg, A. High throughput single cell expression profiling: Taking a closer look on biological response. Clinical Chemistry and Laboratory Medicine, 49(1): 118, 2011. ISSN 1434-6621.

Kubista, M., Strombom, L., Svec, D., Rusnakova, V., Stahlberg, A. High throughput single cell expression profiling: Taking a closer look on biological response. European Pharmaceutical Review, 16(2): 20-24, 2011.

Mikulova, V., Cabinakova, M., Pobudova, J., Tesarova, P., Pavlista, D., Kolostova, K., Kubista, M., Romzova, M., Zima, T. The role of disseminated tumor cells and circulating tumor cells in management of breast cancer patients. Tumor Biology, 31(1): 73, 2010. ISSN 1010-428.

Bergkvist, A., Rusnakova, V., Sindelka, R., Garda, J. M. A., Sjogreen, B., Lindh, D., Forootan, A., Kubista, M. Gene expression profiling – Clusters of possibilities. Methods, 50: 323-335, 2010. ISSN 1046-2023.

Bohuslavova, R., Kolar, F., Kuthanova, L., Neckar, J., Tichopad, A., Pavlinkova, G. Gene expression profiling of sex differences in HIF1-dependent adaptive cardiac responses to chronic hypoxia. Journal of Applied Physiology, 109: 1195-1202, 2010. ISSN 8750-7587.

Coll, A., Nadal, A., Collado, R., Capellades, G., Kubista, M., Messeguer, J., Pla, M. Natural variation explains most transcriptomic changes among maize plants of MON810 and comparable non-GM varieties subjected to two N-fertilization farming practice. Plant Molecular Biology, 73: 349-362, 2010. ISSN 0167-4412.

Kitchen, R. R., Kubista, M., Tichopad, A. Statistical aspects of quantitative real-time PCR experiment design. Methods, 50: 231-236, 2010. ISSN 1046-2023.

Kozubenko, N., Turnovcova, K., Kapcalova, M., Butenko, O., Anderova, M., Rusnakova, V., Kubista, M., Hampl, A., Jendelova, P., Sykova, E. Analysis of In Vitro and In Vivo Characteristics of Human Embryonic Stem Cell-Derived Neural Precursor. Cell Transplantation, 19: 471-486, 2010. ISSN 0963-6897.

Sindelka, R., Sidova, M., Svec, D., Kubista, M. Spatial expression profiles in the Xenopus laevis oocytes measured with qPCR tomography. Methods, 51: 87-91, 2010. ISSN 1046-2023.